We’re now proud to announce the September 2021 release of COCI, which is based on open references to works with DOIs within the Crossref dump dated August 2021. This new release extends COCI with more than 92 Million additional citations, giving a total number of more than 1.18 Billion DOI-to-DOI citation links.
This latest release includes citations from the most recent articles published by the American Chemical Society, whose bibliographic references were opened in February 2021. The ACS back number citations will be available in the next COCI release, when a new processing of all the Crossref data will be completed.
Ivan Heibi, Silvio Peroni & David Shotton (2019). Software review: COCI, the OpenCitations Index of Crossref open DOI-to-DOI citations. Scientometrics, 121 (2): 1213-1228. DOI: https://doi.org/10.1007/s11192-019-03217-6
Finally, just a reminder that the bibliographic and citation data in COCI:
can be queried using the OpenCitations Indexes SPARQL endpoint;
Now that OpenCitations is hosting over one billion freely available scholarly bibliographic citations, this is perhaps an opportune moment to look back to the start of this initiative. A little over eleven years ago, on 24 April 2010, I spoke at the Open Knowledge Foundation Conference, OKCon2010, in London, on the topic
OpenCitations: Publishing Bibliographic Citations as Linked Open Data
I reported that, earlier that same week, I had applied to Jisc for a one-year grant to fund the OpenCitations Project (opencitations.net). Jisc (at that time ‘The JISC’, the Joint Information Systems Committee) was tasked by the UK government, among other things, to support research and development in information technology for the benefit of the academic community.
The purpose of that original OpenCitations R&D project was to develop a prototype in which we:
harvested citations from the open access biomedical literature in PubMed Central;
described and linked them using CiTO, the Citation Typing Ontology [1];
encoded and organized them in an RDF triplestore; and
published them as Linked Open Data in the OpenCitations Corpus (OCC).
I told those at the conference that in this demonstration project, with limited JISC funding, we could not hope to “boil the whole ocean”, but that nevertheless there would be substantial benefits from even partial coverage of citation data from the scholarly literature:
We could show the way and establish best practice.
Despite partial coverage, all key papers would most likely be cited several times.
The overall topological structure of the citation network would be revealed.
We would create a ‘benchmark’ corpus of high-quality RDF citation data that could be used to develop analytical and visualization tools.
We could show the value of open citation data in helping scholars to discover full text articles of all types, and thus encourage subscription-access publishers to release their reference metadata.
The important thing, I said, was to make a start!
The Jisc OpenCitations Project
That JISC grant application was funded, and the project, to last for a year with modest funding of £100K, started in my lab in the Department of Zoology at Oxford University on 1st June 2010, and was subsequently extended for a further six months.
Using data from the Open Access subset of PubMed Central, we created the first prototype release of the OpenCitations Corpus of linked bibliographic citation data, containing 6,529,815 independent bibliographic records of both citing and cited entities, comprising references to ~20% of all post-1980 articles recorded in PubMed, including those to all the most important highly cited papers in every field of biomedical endeavour.
This achievement was almost entirely the result of the excellent work by our chief data wrangler Alex Dutton, whose skill and natural feel for linked data did wonders for this project. Ben O’Steen, Graham Klyne and Alistair Miles made important contributions.
The project also resulted in many other development, described here, most which were developed or at least initiated during a short but wonderfully productive collaboration with Silvio Peroni, who spent six months with me in 2010 as a doctoral student intern from the University of Bologna, to which he subsequently returned to complete his thesis and develop his academic career.
These included:
the deconstruction and re-development of the original version of CiTO into a suite of orthogonal and complementary ontologies covering the whole domain of scholarly publishing – the SPAR (Semantic Publishing and Referencing) Ontologies [2, 3];
the mapping of various existing metadata schemas into RDF using SPAR, including the DataCite Metadata Schema, and subsequently JATS, now the default NISO standard for XML markup of scholarly documents) [4]; and
After the Jisc funding ended and I, after a long career in biological teaching and research, formally retired from the Department of Zoology at the Oxford University, members of the initial OpenCitations team moved on to other things. Like so many grant-funded academic project whose initial financial support had dried up, OpenCitations could have foundered at that stage, as an interesting prototype but with too little content to be useful. However, the concept of providing an open alternative to proprietary citation indexes was too important to abandon. But how could it be transitioned into something enduring and useful, particularly when as a matter of principle one had decided that the citation data should be made freely available, thus precluding income generation by charging for ‘premium’ services or the formation of a commercial spin-off?
Finally, I realized that something radical needed to be done to move OpenCitations forward. I had maintained a lively collaboration with Silvio Peroni at the University of Bologna, resulting between 2011 and 2014 in the publication of 18 articles and conference papers concerning the SPAR ontologies, ontology development, documentation and visualization, and related topics, and in 2015 I invited him to start working with me directly on OpenCitations. It was the best decision I could have made. We decided to take the initial concept and re-implement it from the bottom up. OpenCitations gave Silvio a major computer science project to which he could apply his considerable talent, and soon resulted in the development of a revised RDF data model for describing citation data, the OpenCitations Data Model (OCDM) [5] and a suite of new software tools to harvest, organise and publish citations at linked open data [6]. The credit for almost all the subsequent conceptual and technical developments within OpenCitations, which have incrementally led to our present situation, is due to Silvio Peroni, and the scholarly community is indebted to him for the intelligence, skill and diligent application he has given to OpenCitations over the past six years. I am truly honoured to have Silvio as co-Director of OpenCitations, and wish to take this opportunity to acknowledge his contributions and to thank him publicly.
Our work on OpenCitations at that stage, summarized in [7], would not have been possible without the enthusiastic support of Silvio’s senior colleague Fabio Vitali and of the Department of Computer Science and Engineering at the University of Bologna, which not only provided a stimulating environment for Silvio’s post-doctoral work, but also supplied computing services and infrastructure at no charge to OpenCitations. It was also greatly helped by Professor David De Roure of Oxford University, who gave me an academic home and a formal affiliation within the Oxford e-Research Centre after my retirement from the Department of Zoology, which enabled me to continue to hold research grants.
As has been documented in earlier posts in this blog, we greatly benefitted in 2017 from a grant from the Alfred P. Sloan Foundation which enabled us to purchase a new and more powerful computing infrastructure for the sole use of OpenCitations and to extend and improve our software, and subsequently in 2019 by a project grant from the Wellcome Trust to develop the Open Biomedical Citations in Context Corpus, that permitted the extension of OCDM and SPAR for the characterization of in-text references and their textual contexts.
A significant breakthrough came in January 2018 with our decision to treat citations as first-class data entities, each with its own persistent identifier (PID), the Open Citations Identifier (OCI) [8]. This gave Silvio the freedom to envision a new kind of database, a citation index in which each citation had its own metadata, including citation timespan, citation categorization (e.g. self-citation), and of course the DOIs of the citing and cited publications. The creation of this new index was possible only with the incredible effort by Ivan Heibi, who served as a Research Fellow in the project funded by the Alfred P. Sloan Foundation at that time, and who was entirely responsible for developing the first version of the code necessary for creating such a database. Having harvested all the open references from Crossref metadata dumps, Silvio and Ivan created COCI, the OpenCitations Index of Crossref DOI-to-DOI Citations, which immediately became our principal source of open citations, the original OpenCitations Corpus being retained as a ‘sandbox’ in which to experiment with new data representations, for example those required for the Open Biomedical Citations in Context Corpus. Access to COCI was facilitated by Silvio’s development of a REST API, using his software tool RAMOSE (Restful API Manager Over SPARQL Endpoints), which enables the easily configurable deployment of a REST API over any SPARQL endpoint to an RDF triplestore [9]. We were able to organize our all data, both ‘traditional’ and new, and to encode it in RDF, thanks to the comprehensive OpenCitations Data Model [5], itself based on our SPAR Ontologies [3], which we evolved as necessary to accommodate new data representation requirements.
During this period we published a number of definitions, conference papers and journal articles documenting these advances, details of which can be found here. Of these, the most recent canonical publication describing OpenCitations as an infrastructure for open scholarship, and its datasets, tools, services and activities, is Peroni and Shotton (2020) [10]. We also established the Research Centre for Open Scholarly Metadata at the University of Bologna, primarily to handle administrative, financial and academic aspects of OpenCitations activities.
OpenCitations’ future
The problem remained: how to sustain the OpenCitations infrastructure financially. We were greatly helped by Bilder, Lin and Neylon’s formulation of the Principles of Open Scholarly Infrastructures (POSI) [11], in which they clearly pointing out that reliance solely on grant funding for specific projects was not the answer. OpenCitations compliance with POSI is described here. We were thus immensely grateful that SPARC Europe and other institutions had the wisdom to establish SCOSS (The Global Sustainability Coalition for Open Science Services) to facilitate the crowd-sourced financial support of useful open infrastructures by the scholarly community, including academic libraries, government agencies and other stakeholders. OpenCitations applied for SCOSS support in 2019, which led to the selection of OpenCitations for support in the SCOSS second round.
The donations we are now starting to receive from such stakeholders, and the new staff that this funding has recently allowed us to hire, signal the start of our transition from a financially vulnerable academic project to a sustainable open scholarly infrastructure of real value to the community.
The work of opening more of the global citation graph now requires two things:
that each publisher takes responsibility for ensuring that the references from all of its journal articles and books are submitted, together with all other bibliographic metadata, to open scholarly bibliographic metadata aggregators such as Crossref and DataCite, from which they can be indexed into open citation indexes of sufficient quality, depth of detail and breadth of coverage that these offer genuine alternatives to the expensive proprietary citation indexing services upon which the academic community presently relies; and
that the entire scholarly stakeholder community re-directs a fraction of the enormous sums currently spent on its subscriptions to proprietary bibliographic services in order to support Open Science infrastructures such as OpenCitations that making citations and other forms of scholarly metadata and objects freely available.
[3] Silvio Peroni, David Shotton (2018). The SPAR Ontologies. In Proceedings of the 17th International Semantic Web Conference (ISWC 2018): 119-136. https://doi.org/10.1007/978-3-030-00668-6_8
[4] Peroni S, Lapeyre DA and Shotton D (2012) From Markup to Linked Data: Mapping NISO JATS v1.0 to RDF using the SPAR (Semantic Publishing and Referencing) Ontologies. Proc. 2012 JATS Conference, National Library of Medicine, Bethesda, Maryland, USA (October 2012): 16-17. http://www.ncbi.nlm.nih.gov/books/NBK100491/
[6] Silvio Peroni, David Shotton, Fabio Vitali (2017). One Year of the OpenCitations Corpus: Releasing RDF-based scholarly citation data into the Public Domain. In The Semantic Web – ISWC 2017 (Lecture Notes in Computer Science Vol. 10588, pp. 184–192). Springer, Cham. https://doi.org/10.1007/978-3-319-68204-4_19
[9] Daquino, M., Heibi, I., Peroni, S., & Shotton, D. (2021). Creating Restful APIs over SPARQL endpoints with RAMOSE. Semantic Web. http://arxiv.org/abs/2007.16079
[10] Silvio Peroni, David Shotton (2020). OpenCitations, an infrastructure organization for open scholarship. Quantitative Science Studies, 1(1): 428-444. https://doi.org/10.1162/qss_a_00023
In his call for open citations, Dario Taraborelli hailed the scholarly citation graph (in which the nodes (vertices) are individual academic publications and the links (edges) represent bibliographic citations from one publication to another) as one of humankind’s most important intellectual achievements.
We all understand that the inclusion within our own academic publications of bibliographic references to the works of others is one of the most explicit ways of acknowledging the thoughts, discoveries, achievements and influences of other scholars, and their contributions to our own work. Not only does what we gain from their publications enable us to make intellectual progress, by “standing on the shoulders of giants” as Newton once famously observed [1], but the influence of these publications extends forward in time across the entire intellectual landscape, like gigantic shadows cast at sunset, whether or not those influenced by these publications have occasion to reference them in their own works.
At the anterior margin of a crawling cell, cellular protrusive extension (for example of a pseudopodium) is achieved by the catalysed polymerization of new filaments of the cytoskeletal protein actin from attachment sites on an existing stationary actin filament network, pushing the cell margin forward [2]. The scholarly citation network (or citation graph, the two terms here being used interchangeably) is similarly dynamic and temporally directional, being extended forward as new works of scholarship are published. Extension of knowledge is achieved by the catalytic inspiration provided by existing academic publications, themselves temporally stationary within the expanding citation network, leading to the publication of new works of scholarship that cite these previous publications and thus extend the citation network further into the future. The citation graph is thus not just an acyclic directed graph, but an acyclic temporally directed graph. Indeed, it is this temporal aspect of the citation network that is one of its most important features.
To use another analogy, the human genealogical tree is inherently multidimensional and difficult to represent pictorially in its entirety, because each new birth brings together the family trees of the child’s two parents. However, unless the parents are seriously promiscuous, the resulting genealogical tree is not impossibly complex. In contrast, the scholarly citation network is much more highly interlinked, since each new publication cites not just two but many preceding (‘parent’) publications, which themselves may beget many other citations.
Visualization of the global scholarly citation graph, or portions of it, is thus inherently difficult, and the important temporal aspect of the graph is the one ignored by almost every method used for visualizing aspects of that graph. Existing methods may take the broad view, showing the links, and the strength of those links, between one scholarly domain and another, thus visualizing the ‘structure of science’. Alternatively, they may take a more detailed view of a small section of the graph, visualize the proximity of individual publications to one another. Often a radial display is chosen for this, that shows in closest proximity those papers directly referenced by the selected publication in the centre, then at a greater radius those papers referenced by the cited papers shown in the inner circle, and so on. Because of the graph’s complexity, such displays quickly looses intelligibility after two citation links.
Among a small number of visualization applications that do not ignore the temporal aspect of the graph is Citeology, a temporally based citation network visualization tool developed some years ago by Justin Matejka and colleagues at the design software company Autodesk [3]. Unfortunately, this innovative software prototype was not central to that company’s mission, development ceased, and the Citeology Java app is no longer available. However, in his last email to me, Justin Matejka kindly offered to help others re-create this application.
There is thus an urgent need for innovative new open-source visualization tools that will clearly and dynamically display portions of the global citation graph, for example the direct and indirect citation connections between any two publications or any two individuals, along the temporal axis of publication date. Developers within the open science community please step forward!
References
[1] Isaac Newton, in a 1675 letter to Robert Hooke, wrote “If I have seen further it is by standing on the shoulders of Giants.” https://discover.hsp.org/Record/dc-9792/
[2] Bruce Alberts et al. (2014). Molecular Biology of the Cell. 6th Edition. Garland Science. Chapter 16, The Cytoskeleton.
“Infrastructure at its best is invisible. We tend to only notice it when it fails. If successful, it is stable and sustainable. Above all, it is trusted and relied on by the broad community it serves. Trust must run strongly across each of the following areas: running the infrastructure (governance), funding it (sustainability), and preserving community ownership of it (insurance)”.
These areas are fully define the Principles of Open Scholarly Infrastructure (POSI), which provide a set of guidelines by which open scholarly infrastructure organizations and initiatives that support the research community can be run and sustained.
As far as we are aware, Crossref was the first infrastructure to publish its compliance with POSI, detailed in Geoffrey Bilder’s December 2020 blog post
OpenCitations too espouses POSI and, in January 2021, we monitored the extent of our own compliance with POSI, the results of which are shown in the following diagram.
Governance
●
Coverage across the research enterprise
We gather citations from global scholarship
●
Stakeholder governed
Advisory board currently lacks executive power and is not elected
●
Non-discriminatory membership
Membership open to all those espousing open science
●
Transparent operations
Everything is open
●
Cannot lobby
OpenCitations lobbies to achieve open scholarly citations and bibliographic metadata; it does not engage in political or financial lobbying
●
Living will
Since all our data open, others can recreate our service
●
Formal incentives to fulfill mission & wind-down
No formal plan for wind-down has yet been drawn up
Sustainability
●
Time-limited funds used only for time-limited activities
Grant income should be used solely for grantprojects
●
Goal to generate surplus
Goal not yet realized – income so far too limited
●
Goal to create contingency fund to support operations for 12 months
Goal not yet realized – income so far too limited
●
Mission-consistent revenue generation
Membership fees and solicited donations
●
Revenue based on services, not data
All data and services freely given to community, and thus do not generate income
Insurance
●
Open source
All software under open source licenses
●
Open data
All data available under CC0 waiver
●
Available data
All data available via REST APIs, SPARQL endpoints, query interfaces and data dumps
●
Patent non-assertion
We will not patent anything: OpenCitations’ infrastructure is free to replicate
We at OpenCitations are proud of the results reached in the Insurance area, but realise that we still have some was to go in the other areas. Although the general situation is already satisfying, we are working to strengthen our weak points.
We want to express our gratitude to the 18 institutional members and customers of the Consortium of Swiss Academic Libraries which have now pledged 89,250 euros to support OpenCitations over the next three years. This generous donation is part of a total funding of 320,250 euros destined for the three services currently being promoted by SCOSS: DOAB and OAPEN,PKP, and OpenCitations.
The Consortium of Swiss Academic Libraries involves all cantonal universities, the ETH Domain, the Swiss National Library and other institutions from the fields of education and research as well as from the public sector, with the core task of licensing of e-resources (electronic journals, databases, eBooks) for its members and customers.
As can be read in this post, Susanne Aerni, Head of Consortial Services commented on the pledge: “This pledge exemplifies the broad Swiss commitment to vital infrastructure for Open Access and Open Science. All Swiss Universities, all institutions of the ETH-domain, some Universities of Applied Science, CERN, and the Swiss National Science Foundation support these three vital services through the Consortium of Swiss Academic Libraries.”
Thank you, Switzerland, for your support to OpenCitations!
Here’s some information about their backgrounds, positions and roles at OpenCitations.
Claudio Fabbri (Administrator and Research Manager):
Claudio has taken responsibility for all the day-to-day administrative activities of OpenCitations, including financial arrangements with those organisations supporting OpenCitations and bureaucratic interactions involving our host institution, the University of Bologna.
“After graduating in philosophy, I worked for several years as a librarian in university libraries. Considering my professional background, it came naturally to me to get in touch first with the Open Access movement and then, in a broader view, with Open Science principles. Now, as the Research Manager for OpenCitations, I’m proud to lead the administrative work for this great infrastructure. I’m interested in the history of science, especially how scientific communication has changed over the years”.
Chiara Di Giambattista (Communications Director and Community Development Manager):
Chiara takes care of all communications and social interactions made on behalf of OpenCitations, in terms of outreach to the scholarly community, contacts with present and potential supporting organisations, and OpenCitations’ communications via social media. She is developing a comprehensive mission statement and communications strategy for OpenCitations, designed to enhance the community’s understanding of OpenCitations’ global mission and awareness of its financial needs, to increase usage of OpenCitations services, and to foster collaborative interactions with like-minded infrastructures and institutions.
“I graduated in Visual Arts at the University of Bologna with the thesis “Presenting the future in the Digital Age. The semiotic convergence between art and IxD design in the practice of Future Casting”. Being deeply passionate about the adaptive potential of language in all its forms, from classical linguistics to visual semiotics, I have various experiences in web journalism and publishing. My role in OpenCitations is to improve the engagement of OpenCitations with the scholarly community, to develop OpenCitations’ social media platforms (LinkedIn and Twitter) and the OpenCitations blog, and to communicate and promote the values, services and impact of OpenCitations throughout the world”.
Giuseppe Grieco (Software and Systems Developer):
As a skilled computer scientist, Giuseppe will take charge of all the technical development related to the OpenCitations services, data acquisition, and bibliographic metadata and citations provision.
“I have a degree in computer science. I have been passionate about this field since I was thirteen years old, when I started to learn the basics of algorithms and programming. Most recently, I have been dedicating myself to artificial intelligence by pursuing Masters studies at the University of Pisa. I have always tried to take every opportunityto put into practice what I’ve been studying . Now, with my appointment at OpenCitations, I will do so by developing upgrades and enhancements to the existing software infrastructure”.
More new people will be getting involved in OpenCitations in the autumn. Watch this space!
The interconnection between Wikipedia and Wikidata is now larger than ever.
The Wikipedia Citations dataset currently includes around 30M citations from Wikipedia pages to a variety of sources – of which 4M are to scientific publication. The increase of the connection with external data services and the provision of structured data to one of the key elements of Wikipedia articles has two significant benefits: first of all, a better discoverability of relevant encyclopedic articles related to scholarly studies; furthermore, the enacting of Wikipedia as a social authority and policy hub which would enable policymakers to assess the importance of an article, person, research group and institution by looking at how many Wikipedia articles cite them.
These are the motivations behind the “Wikipedia Citations in Wikidata” project, supported by a grant from the WikiCite Initiative. From January 2021 until the end of April, the team of Silvio Peroni (director of OpenCitations), Giovanni Colavizza, Marilena Daquino, Gabriele Pisciotta and Simone Persiani from the University of Bologna (Department of Classical Philology and Italian Studies) has been working in developing a codebase to enrich Wikidata with citations to scholarly publications that are currently referenced in English Wikipedia. This codebase consists of four software modules in Python and integrates new components (a classifier to distinguish citations by cited source and a look-up module to equip citations with identifiers from Crossref or other APIs). In so doing, Wikipedia Citations extends upon prior work which only focused on citations already equipped with identifiers.
In the first two steps of the workflow (extractor and converter) the mapping between the various ways Wikipedia citations are represented in Wikipedia articles and the OpenCitations Data Model (OCDM) has been implemented and then enriched with a component responsible to find new identifiers to the entities in a dataset compliant with OCDM (enricher), while in the pusher step the mapping between the OCDM and Wikidata has been enabled, and the code has been finally released in GitHub.
WCW Workflow Diagram
The extensive documentation that has accompanied the release of the codebase is crucial for one of the principal aims of the project, I.e., the adoption and reuse of the codebase by the community in other relevant Wikimedia projects, while the engagement of various communities (Wikidata, libraries, scholars…) is favored on one side by offering an increased number of citations data included in Wikidata, on the other side by blogging and sharing the updates on Twitter and public mailing lists
This project, whose ambitious purpose is to make Wikipedia contents better discoverable and enrich Wikidata with a ready-to-use corpus for further analysis or for developing new services, is opened to future perspectives. The intention is to use the software to create a dataset of Wikipedia English citations to understand, in particular, how many new entities (i.e., citing Wikipedia pages, cited articles and venues, authors) should be added to Wikidata in order to upload all the set of extracted citations, with the result of adding a massive amount of new bibliographic-related entities to the dataset.
The first steps have been taken, now we aim to extend the engagement of the community involved, especially those scholars that leverage Wikidata in existing services, and to interact with the scholars, libraries and institutions interested in a new approach to research, focused on people (from individuals to research groups) and their intellectual relevance.
For the second year, OpenCitations has taken part in the LIBER annual conference. LIBER (Ligue des Bibliothèques Européennes de Recherche – Association of European Research Libraries) is a network that gathers 440 research libraries, based in more than 40 countries all over the world, with the mission of supporting Europe’s research libraries by highlighting their value to policymakers, providing resources and training, and forming valuable partnerships.
Since 1951, the LIBER Annual Conference is a key event for the entire network, a keenly anticipated meeting for research library professionals whose mission is “to identify the most pressing needs for research libraries, and to share information and ideas for addressing those needs”. Due to the ongoing pandemic restrictions, the 50th LIBER meeting (23-25 June 2021) was held online, as was the 2020 meeting, with digital co-hosting by the University of Belgrade Library in Serbia. The online-showcase format, however, didn’t constrain the creation of a vital virtual square, fostered by the voices of 70 speakers. The main theme of the conference, “Libraries and Open Knowledge: from vision to implementation” was deepened in 12 parallel sessions.
Professor Silvio Peroni, Director of OpenCitations, participated in Session #5 ‘How Can Open Infrastructures Support the Role of Research Libraries?’ with a presentation dedicated to the benefits of Open Infrastructures for libraries, dialoguing with James MacGregor (interim Managing Director of the Public Knowledge Project), Joanna Ball (Head of Roskilde University Library), and Niels Stern (director of OAPEN and co-Director of DOAB).
The session, chaired by Maaike Napolitano (National Library of the Netherlands) opened with a presentation by Fidan Limani (Research assistant at ZBW– Leibniz Information Centre for Economics) about the integration of scholarly artifacts from the domain of economics using Knowledge Graphs (KG), and the creation of a network of entities describing objects of interest and connections, while keeping a library perspective. The use of citation links connecting datasets and citations, and the adoption of ontologies and data exportation in RDF would facilitate a possible beneficial collaboration between ZBW and Open Infrastructures such as OpenCitations (whose data is itself in the form of a Knowledge Graph).
OpenCitations also shares some common features with the other Open Infrastructures described in the second presentation: the financial support from SCOSS project; the community-based approach; and their promising value for libraries and the entire scholarly community.
OpenCitations is an independent not-for-profit infrastructure organization dedicated to open scholarship and the publication of open bibliographic and citation data by the use of Semantic Web (Linked Open Data) technologies, engaged in advocacy for open citations and open bibliographic metadata, as a founding member of both the Initiative for Open Citations (I4OC) and the Initiative for Open Abstracts (I4OA). It provides data containing more than 7 hundred million citations that the community can use for any purpose. Such data can be crucial as a vehicle for use in national and international research evaluation exercises to make such activities more transparent and reproducible as compared to other proprietary services. Librarians can use OC citation data (e.g., via our REST API) to enhance or develop tools to support their authors, researchers, students, institutional administrators in different kind of contests, for instance by providing metrics to monitor research at your institution and by improving the discoverability of research products such as publications and data.
OAPEN is a no-profit foundation dedicated to increase the discoverability of open access books and trust around them. They are running three Open-Source platforms enabling open access to books: the Directory of Open Access Books (DOAB) – a freely available basic indexing service easy integrable within library catalogues; OAPEN Library – a publication platform dedicated to hosting, preserving and distributing books; OAPEN OA Books Toolkit – public information resource for authors to build trust around open-access books.
PKP (Public Knowledge Project) is a software and library project, consisting of three applications (Open Journal System, Open Pre-printer System and Open Monograph Press).
The dialogue during this LIBER session wasn’t a mere presentation of these projects and their technical properties: the speakers emphasized the importance of ensuring the participation and the engagement of the stakeholder community, pointed out the crucial value of the support received – not only financial – from Research Libraries, and discussed how such Open Infrastructures can be beneficial for libraries.
How can libraries support Open Infrastructures? And what role do they play in a long-term solution? According to Joanna Ball, from a librarian perspective, it’s not only a who-benefits-whom problem, but it’s more about finding a “third way, about developing mutually beneficial partnerships, and going beyond the traditional way of approaching things so that we can really play to each other’s strengths.”
This approach is fully aligned with OpenCitations’ intentions. As Silvio Peroni underlined, in most of cases the active collaboration between Open Infrastructures and libraries is not only about the financial support, but in cooperatively reach a common goal. In particular, “if infrastructures like OpenCitations provide appropriate and easy-to-use interfaces and tools that allow librarians to contribute appropriate bibliographic metadata, and if librarians are willing to enter such metadata from their own records, libraries may become a significant reliable source of this kind of information”. The result of such a ‘crowd-sourced’ entry of bibliographic metadata by libraries would be an enrichment of the overall global open knowledge graph made available through citational links.
In the last presentation, dedicated to two services provided by OPERAS, Emilie Blotière, (CNRS) and Tiziana Lombardo (Net7) reiterated the value of scholarly communication. COESO and GO TRIPLE, funded by the European Commission, aim in fact to create a persistent dialogue in the Social Sciences and Humanities community, by tackling the fragmentation and becoming a meeting point among different communities.
What emerged from the session is the importance of communication, cooperation and networking between Open Infrastructures and Libraries, and this is a message that perfectly matches with the core values of LIBER, collaboration and inclusivity. The next LIBER annual conference is scheduled for June 2022 in Odense, hopefully recreating the physical and enthusiastic gathering of the previous meetings.
At the end of 2019, OpenCitations was selected by The Global Sustainability Coalition for Open Science Service (SCOSS) for presentation to the international scholarly community for crowd-sourced sustainability funding, along with the Public Knowledge Project (PKP) and the Directory of Open Access Books (DOAB). Since 2017, SCOSS has been helping identify non-commercial services essential to Open Science, and making recommendations that these services should be considered for funding support by the global OA/OS community of stakeholders (academic institutions and their libraries, research institutes, publishers, funding organisations, national and regional governments, international organisations, learned societies and service providers worldwide, and everyone who is invested in Open Access and Open Science).
Since OpenCitations is not-for-profit and all our data and services are free, the relationship with SCOSS is crucial in maintaining and developing OpenCitations’ infrastructure and continuing to make our data and service freely available.
Thanks to the renewed engagement and support from the OA/OS Community, 2020hasbeenayearofgreatachievementsforOpenCitations.
As first described here, the starting point has been the set-up of an initial open governance structure. For administrative convenience, OpenCitations is managed by the Research Centre for Open Scholarly Metadata at the University of Bologna. Currently, the organizational bodies included in the OpenCitations governance are three: the Directors, the International Advisory Board, and the Council. All these bodies are regulated and described in two documents, “Organizational Bodies and Finances”, and “Rules for Membership” that specifically describes the criteria for Membership of OpenCitations.
The generous support received from OpenCitations’ donors and members during 2020 is making it possible to pay for necessary services and the salaries of personnel to support the daily activities of OpenCitations, thus enhancing the administration of OpenCitations and communication with new supporters and collaborators.
Separately, the involvement of OpenCitations in different funding applications throughout 2020 has led to the successful development of two projects.
The first one, OpenAIRE Nexus, started on 1 January 2021 with the aim to create a framework of services for assisting in publishing research, monitoring its impact, helping promote its discovery, and integrating it into the European Open Science Cloud (EOSC) for the benefit of the open science community worldwide. OpenCitations’ role in this will be to provide open bibliographic citations as part of the open data components of OpenAIRE and the EOSC.
The second project, the Open Biomedical Citations in Context Corpus, funded by the Wellcome Trust from July 2019 to December 2020, had the aim to expand the types of citation data provided by OpenCitations to include information about each individual in-text reference and its semantic context. This makes it possible, for example, to distinguish references that are cited only once from those that are cited multiple times, to see which references are cited together (e.g. in the same sentence), to determine in which section of the article references are cited (e.g. Introduction, Methods), and to specify the textual context of each citation, thus potentially making it possible to determine the function of the citation. Part of the grant received for this project was used to cover the salaries and expenses of developers who worked on the creation of a new persistent identifier (PID) for in-text reference pointers, the In-Text Reference Pointer Identifier (InTRePID) first described here, in the release of the new version of the OpenCitations Data Model(OCDM), and the creation of a new database, the Open Biomedical Citations in Context Corpus (CCC) containing the metadata describing the in-text references that we processed, drawn from the open biomedical literature.
Through its projects, OpenCitations has strengthened its connections with data of topical urgency. A relevant and timely output, for instance, was the creation of the Coronavirus Open Citations Dataset, which contains (as of 16 May 2020) information about 189,697 citations and about the 49,719 citing or cited articles involved in these citations related to the COVID-19 pandemic.
The involvement of OpenCitations in the SCOSS community has included our participation to several SCOSS-related events (amongst others, the SCOSS Webinar for the Couperin Consortium, the JROST Conference 2020), and the Jisc Webinar Sustaining the future of key open research infrastructure services (SCOSS) in order to present OpenCitations to the OA/OS community, together with the other Open Infrastructures selected in the first and second funding cycles. In addition, during 2020 OpenCitations participated in several international conferences, talks and meetups, including PIDapalooza 2020 and the International Semantic Web Conference 2020, and organized and co-hosted the Workshop on Open Citations and Scholarly Metadata 2020 (September 2020), gathering scholars, policy makers, publishers, and open scholarly data advocates.
Being part of the SCOSS network during 2020 has been an enriching and stimulating opportunity. The support of the international coalition for Open Science has resulted in a massive interest from European governments and Institutions (including the French Government through its National Plan for Open Science, the AgroParisTech, the Katholieke Universiteit Leuven and the Royal Danish Library), and the involvement of the Canadian Research Knowledge Network and the Council of Australian University Librarians. So far, 2021 seems to be equally promising, as judged by the increasing support being shown by US consortia for open infrastructures. Between May 2020 and April 2021 the US was responsible for 19% of the traffic to OpenCitations services, and every month has been listed in the top 4 countries using our data.
Despite the enthusiastic results, there’s still much to be done: 2020 was the first year of a three-year-long collaborative journey, in which OpenCitations will be moving forward with SCOSS to create an open, secured and inclusive future for science and research.
OpenAIRE-Nexus is an H2020 project funded by the European Commission which aims at bringing together, within the European Open Science Cloud (EOSC), fourteen new services focused on the development and promotion of Open Science. OpenCitations is directly involved in this project through the Department of Classical Philology and Italian Studies at the University of Bologna.
In the context of this OpenAIRE-Nexus project, our goal is to make all services offered by OpenCitations compatible with OpenAIRE, so as to guarantee semantic and technical interoperability with all the other Open Science services available in the EOSC. For this purpose, we now seek applicants for a new one-year research fellowship to be held from May 2021 (renewable for an additional year), for which the application closing deadline is 31 March 2021.
The goal of the Research Fellowship is to study the current limitations of the OpenCitations infrastructure, and possible improvements to introduce into it, in order to integrate it with OpenAIRE and the EOSC. The Research Fellow, who will work in collaboration with Silvio Peroni, Director of OpenCitations, is expected to address issues relating to the provision of Web services, the management of distributed and heterogeneous databases, and data ingestion and conversion processes.
The Call for Applications (in Italian and in English) is available online on the website of the University of Bologna. It also includes an attachment with a description of OpenCitations and of the activities related to the position. The position has a net salary (exempt from income tax, after deduction of social security contributions) in excess of 20K euros per year. As indicated in the Call for Applications, candidates need to apply exclusively through the University of Bologna web portal.
For further information, please contact Silvio Peroni (email: silvio dot peroni at unibo dot it).